stemflow.utils.plot_gif
make_sample_gif(data, file_path, col='abundance', Spatio1='longitude', Spatio2='latitude', Temporal1='DOY', figsize=(18, 9), xlims=None, ylims=None, grid=True, lng_size=20, lat_size=20, xtick_interval=None, ytick_interval=None, log_scale=False, vmin=0.0001, vmax=None, lightgrey_under=True, adder=1, dpi=300, fps=30, cmap='plasma', verbose=1)
Create a GIF visualizing spatio-temporal data using plt.imshow.
Parameters:
-
data
(DataFrame
) –Input DataFrame, pre-filtered for the target area/time.
-
file_path
(str
) –Output GIF file path.
-
col
(str
, default:'abundance'
) –Column containing the values to plot.
-
Spatio1
(str
, default:'longitude'
) –First spatial variable column.
-
Spatio2
(str
, default:'latitude'
) –Second spatial variable column.
-
Temporal1
(str
, default:'DOY'
) –Temporal variable column.
-
figsize
(Tuple[Union[float, int], Union[float, int]]
, default:(18, 9)
) –Figure size.
-
xlims
(Tuple[Union[float, int], Union[float, int]]
, default:None
) –x-axis limits.
-
ylims
(Tuple[Union[float, int], Union[float, int]]
, default:None
) –y-axis limits.
-
grid
(bool
, default:True
) –Whether to display a grid.
-
lng_size
(int
, default:20
) –Number of longitudinal pixels (resolution).
-
lat_size
(int
, default:20
) –Number of latitudinal pixels (resolution).
-
xtick_interval
(Union[float, int, None]
, default:None
) –Interval between x-ticks.
-
ytick_interval
(Union[float, int, None]
, default:None
) –Interval between y-ticks.
-
log_scale
(bool
, default:False
) –Whether to apply a logarithmic scale to the data.
-
vmin
(Union[float, int]
, default:0.0001
) –Minimum value for color scaling.
-
vmax
(Union[float, int, None]
, default:None
) –Maximum value for color scaling.
-
lightgrey_under
(bool
, default:True
) –Use light grey color for values below vmin.
-
adder
(Union[int, float]
, default:1
) –Value to add before log transformation.
-
dpi
(Union[float, int]
, default:300
) –Dots per inch for the output GIF.
-
fps
(int
, default:30
) –Frames per second for the GIF.
-
cmap
(str
, default:'plasma'
) –Colormap to use.
-
verbose
(int
, default:1
) –Verbosity level.
Source code in stemflow/utils/plot_gif.py
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